Regeneration
Long-term live imaging, cell identification and cell tracking in regenerating crustacean legs
Çevrim, Laplace-Builhé, Sugawara, Rusciano, Labert, Brocard, Almazán, Averof
bioRxiv, 2024
Crustacean leg regeneration restores complex microanatomy and cell diversity
Almazan, Çevrim, Musser, Averof, Paris
Science Advances, vol. 8, 2022, pp. eabn9823
Distinct gene expression dynamics in developing and regenerating limbs
Sinigaglia, Almazan, Lebel, Sémon, Gillet, Hughes, Edsinger, Averof, Paris
Proc Natl Acad Sci USA, vol. 119, 2022, pp. e2119297119
Tracking cell lineages in 3D by incremental deep learning
Sugawara, Çevrim, Averof
eLife, vol. 11, 2022, pp. e69380
The multifaceted role of nerves in animal regeneration
Sinigaglia, Averof
Current Opinion in Genetics and Development, vol. 57, 2019, pp. 98–105
Live imaging reveals the progenitors and cell dynamics of limb regeneration
Alwes, Enjolras, Averof
eLife, vol. 5, 2016, pp. e19766
Old questions, new models: unraveling complex organ regeneration with new experimental approaches
Grillo, Konstantinides, Averof
Current Opinion in Genetics and Development, vol. 40, 2016, pp. 23-31
A common cellular basis for muscle regeneration in arthropods and vertebrates
Konstantinides, Averof
Science, vol. 343, 2014, pp. 788-791
New tools and emerging systems
The crustacean model Parhyale hawaiensis
Paris, Wolff, Patel, Averof
Current Topics in Developmental Biology, vol. 147, 2022, pp. 199-230
CeLaVi: an interactive cell lineage visualisation tool
Salvador-Martinez, Grillo, Averof, Telford
Nucleic Acids Research, vol. 49, 2021, pp. W80–W85
Clonal analysis by tunable CRISPR-mediated excision
Gilles, Schinko, Schacht, Enjolras, Averof
Development, vol. 146, 2019, pp. dev170969
Ramos, Gustafsson, Labert, Salecker, Nilsson, Averof
BMC Biology, vol. 17, 2019, p. 67
Is it possible to reconstruct an accurate cell lineage using CRISPR recorders?
Salvador-Martinez, Grillo, Averof, Telford
eLife, vol. 8, 2019, pp. e40292
Kao, Lai, Stamataki, Rošić, Konstantinides, Jarvis, Di Donfrancesco, Pouchkina-Stancheva, Sémon, Grillo, Bruce, Kumar, Siwanowicz, Le, Lemire, Eisen, Extavour, Browne, Wolff, Averof, Patel, Sarkies, Pavlopoulos, Aboobaker
eLife, vol. 5, 2016, pp. e20062
Efficient CRISPR-mediated gene targeting and transgene replacement in the beetle Tribolium castaneum
Gilles, Schinko, Averof
Development, vol. 142, 2015, pp. 2832-2839
Functional genetics for all: engineered nucleases, CRISPR and the gene editing revolution
Gilles, Averof
EvoDevo, vol. 5, 2014, p. 43
A versatile strategy for gene trapping and trap conversion in emerging model organisms
Kontarakis, Pavlopoulos, Kiupakis, Konstantinides, Douris, Averof
Development, vol. 138, 2011, pp. 2625-2630
Functionality of the GAL4/UAS system in Tribolium requires the use of endogenous core promoters
Schinko, Weber, Viktorinová, Kiupakis, Averof, Klingler, Wimmer, Bucher
BMC Developmental Biology, vol. 10, 2010, p. 53
Pavlopoulos, Averof
Proc Natl Acad Sci USA, vol. 102, 2005, pp. 7888-7893
Efficient transformation of the beetle Tribolium castaneum using the Minos transposable element
Pavlopoulos, Berghammer, Averof, Klingler
Genetics, vol. 167, 2004, pp. 737-746
Early development, body axis formation and segmentation
MicroRNAs act as cofactors in Bicoid-mediated translational repression
Rödel, Gilles, Averof
Current Biology, vol. 23, 2013, pp. 1579-1584
A segmentation clock with two-segment periodicity in insects
Sarrazin, Peel, Averof
Science, vol. 336, 2012, pp. 338-341
EGF signaling and the origin of axial polarity among the insects
Lynch, Peel, Drechsler, Averof, Roth
Current Biology, vol. 20, 2010, pp. 1042-1047
Peel, Averof
Developmental Dynamics, vol. 239, 2010, pp. 2875-2887
Expression of hunchback during trunk segmentation in the branchiopod crustacean Artemia franciscana
Kontarakis, Copf, Averof
Development, Genes and Evolution, vol. 216, 2006, pp. 89-93
Ancestral role of caudal genes in axis elongation and segmentation
Copf, Schröder, Averof
Proc Natl Acad Sci USA, vol. 101, 2004, pp. 17711-17715
Specification of left-right asymmetry in the embryonic gut of Drosophila
Ligoxygakis, Strigini, Averof
Development, vol. 128, 2001, pp. 1171-1174
Hox genes and body plan evolution
Averof, Pavlopoulos, Kontarakis
Paleodiversity, 3 suppl, 2010, pp. 141-145
Liubicich, Serano, Pavlopoulos, Kontarakis, Protas, Kwan, Chatterjee, Tran, Averof, Patel
Proc Natl Acad Sci USA , vol. 106, 2009, pp. 13892-13896
Pavlopoulos, Kontarakis, Liubicich, Serano, Akam, Patel, Averof
Proc Natl Acad Sci USA, vol. 106, 2009, pp. 13897-13902
Copf, Rabet, Averof
Developmental Biology, vol. 298, 2006, pp. 87-94
Copf, Rabet, Celniker, Averof
Development, vol. 130, 2003, pp. 5915-5927
Arthropod Hox genes: insights on the evolutionary forces that shape gene functions
Averof
Current Opinion in Genetics and Development, vol. 12, 2002, pp. 386-392
Arthropod evolution: same Hox genes, different body plans
Averof
Current Biology, vol. 7, 1997, pp. R634-636
Crustacean appendage evolution associated with changes in Hox gene expression
Averof, Patel
Nature, vol. 388, 1997, pp. 682-686
Diversification of arthropod Hox genes as a paradigm for the evolution of gene functions
Averof, Dawes, Ferrier
Seminars in Cell and Developmental Biology, vol. 4, 1996, pp. 539-551
Hox genes and the diversification of insect and crustacean body plans
Averof, Akam
Nature, vol. 376, 1995, pp. 420-423
HOM/Hox genes of Artemia: implications for the origin of insect and crustacean body plans
Averof, Akam
Current Biology, vol. 3, 1993, pp. 73-78
Origin of evolutionary novelties
Shiga, Kato, Aragane-Nomura, Haraguchi, Saridaki, Watanabe, Iguchi, Yamagata, Averof
bioRxiv, 2017
Development: a deep breath for endocrine organ evolution
Grillo, Casanova, Averof
Current Biology, vol. 24, 2014, pp. R38-R40
Franch-Marro, Martín, Averof, Casanova
Development, vol. 133, 2006, pp. 785-790
Damen, Saridaki, Averof
Current Biology, vol. 12, 2002, pp. 1711-1716
Evolutionary origin of insect wings from ancestral gills
Averof, Cohen
Nature, vol. 385, 1997, pp. 627-630
Insect-crustacean relationships: insights from comparative developmental and molecular studies
Averof, Akam
Phil Trans Roy Soc B, vol. 347, 1995, pp. 293-303
Molecular evolution
Evidence for multiple independent origins of trans-splicing in Metazoa
Douris, Telford, Averof
Molecular Biology and Evolution, vol. 27, 2010, pp. 684-693
Evidence for a high frequency of simultaneous double-nucleotide substitutions
Averof, Rokas, Wolfe, Sharp
Science, vol. 287, 2000, pp. 1283-1286
DNA sequence evolution: the sounds of silence
Sharp, Averof, Lloyd, Matassi, Peden
Philosophical transactions of the Royal Society of London. Series B, Biological sciences, vol. 349, 1995, pp. 241-247